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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29681440_29681759_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29681440 - 29681759

Intron Length:

320

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

TTTTTTCCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCATAAT

U12 Branch Point Sequence:

AGTTCCATAATT

Flanking Amino Acid:

TLACFVAILIGLCLTLLLLA

Intron Amino Acid Position:

415

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

81.8

Major BPS

62.9

0.32

1.2

63.9

38.4

Major PPT

89.8

0.9

0.6

89.3

19.6

Minor 5ss

41.9

-0.9

2.8

57.3

41.2

Minor BPS

70.8

0.73

1.6

84.59

35.5

Associated Gene:

Gene:

PSEN1

Ensembl Gene ID:

ENSAPLG00000006843

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043266

29666819 - 29682704

15886

ENSAPLT00000007129

29665034 - 29682704

17671