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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29731661_29732332_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29731661 - 29732332

Intron Length:

672

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TGGGTTTGTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAC

U12 Branch Point Sequence:

TTCTCTGGTATG

Flanking Amino Acid:

MPSRNFLAVKNVRGEYY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.7

44.5

Major BPS

0.5

0.9

61.4

35.9

Major PPT

69.9

0.45

1.1

61.5

48.6

Minor 5ss

37.4

-1.4

42.1

44.4

Minor BPS

41.3

-0.8

2.3

51.15

43.8

Associated Gene:

Gene:

PAPLN

Ensembl Gene ID:

ENSAPLG00000007165

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007432

29730692 - 29755336

24645