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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29732506_29733115_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29732506 - 29733115

Intron Length:

610

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CATGCTTTCATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTTAT

U12 Branch Point Sequence:

GTTTCTTTGACT

Flanking Amino Acid:

GPTTEPLIIELISQEPNPGV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.3

1.04

0.8

79.7

35.4

Major BPS

75.1

0.62

65.6

Major PPT

70.4

0.46

0.9

64.6

36.2

Minor 5ss

-1.9

3.2

43.9

Minor BPS

82.6

1.11

91.97

30.4

Associated Gene:

Gene:

PAPLN

Ensembl Gene ID:

ENSAPLG00000007165

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007432

29730692 - 29755336

24645