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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29740921_29741545_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29740921 - 29741545

Intron Length:

625

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTGAGTGGT

5'SS Class:

major

3'SS Sequence:

TCTCTGTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTAAC

U12 Branch Point Sequence:

CTGCACTTACTT

Flanking Amino Acid:

CNMQPCYLPQQVPSMQDTMG

Intron Amino Acid Position:

330

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.35

1.3

63.1

43.4

Major BPS

59.1

0.23

1.2

61.6

34.1

Major PPT

85.2

0.79

0.8

79.9

32.1

Minor 5ss

29.9

-2.3

3.2

35.6

41.4

Minor BPS

49.1

0.01

1.8

65.95

44.9

Associated Gene:

Gene:

PAPLN

Ensembl Gene ID:

ENSAPLG00000007165

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007432

29730692 - 29755336

24645