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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29741633_29742172_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

29741633 - 29742172

Intron Length:

540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTCAGAAG

5'SS Class:

weak_major

3'SS Sequence:

TTTCTCTTCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAGGAT

U12 Branch Point Sequence:

CTTGCCTGCATG

Flanking Amino Acid:

TRYNPNSPATDSGRMLAGSS

Intron Amino Acid Position:

359

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.6

0.2

1.2

55.1

43.4

Major BPS

51.9

0.05

1.4

51.7

43.9

Major PPT

87.4

0.84

0.7

80.6

31.4

Minor 5ss

26.3

-2.7

3.1

42.7

Minor BPS

46.7

-0.4

2.1

55.5

46.3

Associated Gene:

Gene:

PAPLN

Ensembl Gene ID:

ENSAPLG00000007165

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007432

29730692 - 29755336

24645