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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29742456_29742586_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29742456 - 29742586

Intron Length:

131

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCTGGA

5'SS Class:

major

3'SS Sequence:

CTTCTGTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGGTAT

U12 Branch Point Sequence:

TATTGCTGCAGC

Flanking Amino Acid:

GCPFSSCHQNRYGCCPDGVT

Intron Amino Acid Position:

453

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.2

63.3

43.4

Major BPS

44.6

-0.3

1.4

38.8

41.4

Major PPT

78.2

0.64

0.8

73.2

31.7

Minor 5ss

36.2

-1.6

3.4

49.4

46.8

Minor BPS

43.1

-0.5

2.4

60.14

44.8

Associated Gene:

Gene:

PAPLN

Ensembl Gene ID:

ENSAPLG00000007165

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007432

29730692 - 29755336

24645