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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29746266_29747151_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29746266 - 29747151

Intron Length:

886

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTCA

5'SS Class:

strong_major

3'SS Sequence:

GCTCCTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGTTAAT

U12 Branch Point Sequence:

AGGCCGTTAATC

Flanking Amino Acid:

MKDGRPVSSDRHTYQSDSSL

Intron Amino Acid Position:

797

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

73.7

33.1

Major BPS

0.55

1.2

73.3

39.1

Major PPT

75.1

0.57

0.9

68.4

37.3

Minor 5ss

38.7

-1.3

2.9

47.9

47.8

Minor BPS

49.5

-0

2.1

58.96

40.2

Associated Gene:

Gene:

PAPLN

Ensembl Gene ID:

ENSAPLG00000007165

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007432

29730692 - 29755336

24645