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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29750937_29752265_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29750937 - 29752265

Intron Length:

1329

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCATTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTACAG

Flanking Amino Acid:

TGNNVNIRWSRNGVPMRADG

Intron Amino Acid Position:

1010

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.8

79.3

31.1

Major BPS

100

1.24

0.5

100

Major PPT

86.7

0.82

0.7

80.9

29.6

Minor 5ss

33.2

-1.9

2.8

46.4

Minor BPS

55.7

0.04

2.1

70.06

42.7

Associated Gene:

Gene:

PAPLN

Ensembl Gene ID:

ENSAPLG00000007165

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007432

29730692 - 29755336

24645