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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29761583_29763458_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
29761583 - 29763458

Intron Length:
1876

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAAATCA

5'SS Class:
strong_major

3'SS Sequence:
GTTTACATTTTAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTTAAT

U12 Branch Point Sequence:
ATTTAATGAATT

Flanking Amino Acid:
RKTDFPMKNSVPEVEGEADS

Intron Amino Acid Position:
318

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82
0.75
0.9
73.8
30.8

Major BPS
90.7
1.01
0.7
90
19.9

Major PPT
74.7
0.56
0.9
71.4
39.1

Minor 5ss
37.6
-1.4
3.1
48.6
47.1

Minor BPS
54.5
0.22
1.9
78.09
37.6

Associated Gene:

Gene:
NUMB

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

29757943 - 29792252
34310

29757943 - 29792252
34310