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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29763759_29765654_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
29763759 - 29765654

Intron Length:
1896

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACGGGGT

5'SS Class:
major

3'SS Sequence:
TTTCCTCCAACAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTCAT

U12 Branch Point Sequence:
TTTCCTCCAACA

Flanking Amino Acid:
EIMRQMPDAKVETEMKTVAP

Intron Amino Acid Position:
218

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.7
0.7
1
68
43.2

Major BPS
92.2
1.05
0.7
91.9
19.6

Major PPT
78.3
0.64
0.8
74.2
29.5

Minor 5ss
29.9
-2.3
3.8
46.9
48.5

Minor BPS
55.4
0.17
1.9
74.2
37

Associated Gene:

Gene:
NUMB

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

29757943 - 29792252
34310

29757943 - 29792252
34310