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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29864939_29866991_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

29864939 - 29866991

Intron Length:

2053

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTTGGCAGG

5'SS Class:

weak_major

3'SS Sequence:

CGGCCGCCCGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCTCCAT

U12 Branch Point Sequence:

GCCGCCAGCATC

Flanking Amino Acid:

VTTPVAFGLTGLFDEPLGIA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.2

0.15

1.3

46.6

48.8

Major BPS

52.4

0.06

1.3

41.7

Major PPT

58.5

0.19

0.9

34.1

Minor 5ss

33.3

-1.9

2.9

32.4

42.2

Minor BPS

37.5

-1

40.2

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029481

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039379

29864895 - 29871450

6556