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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29870379_29870868_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29870379 - 29870868

Intron Length:

490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TCCTGTCCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTCT

U12 Branch Point Sequence:

TCCTGTCCACCA

Flanking Amino Acid:

AVNYMLQHPQVKGPGIGLLG

Intron Amino Acid Position:

213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

68.7

36.4

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

70.2

0.45

0.9

62.7

38.5

Minor 5ss

29.3

-2.4

3.5

46.3

Minor BPS

37.3

-0.9

2.2

47.2

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029481

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039714

29863799 - 29873625

9827

ENSAPLT00000039379

29864895 - 29871450

6556