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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29871447_29873585_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

29871447 - 29873585

Intron Length:

2139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAATGTGG

5'SS Class:

major

3'SS Sequence:

GGGAGCACACCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATGGAA

U12 Branch Point Sequence:

AGAGAAAGAACT

Flanking Amino Acid:

QAFFHKYLNDNYTALPSLPS

Intron Amino Acid Position:

421

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.3

0.41

1.1

56.9

42.8

Major BPS

54.5

0.11

1.4

55.4

Major PPT

48.3

-0.1

1.1

40.7

Minor 5ss

37.9

-1.4

3.3

46.8

43.1

Minor BPS

38.2

-0.8

1.9

53.02

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029481

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039714

29863799 - 29873625

9827