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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29872157_29875135_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

29872157 - 29875135

Intron Length:

2979

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTCATTTGC

5'SS Class:

weak_major

3'SS Sequence:

GGCCATGGGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCGGAAT

U12 Branch Point Sequence:

GGGGGCGGAATC

Flanking Amino Acid:

MRFESHGVAALSLSRLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.4

50.6

41.6

Major BPS

41.8

-0.5

1.5

43.3

Major PPT

-0

1.2

41.6

42.8

Minor 5ss

37.3

-1.4

2.7

41.1

39.1

Minor BPS

-1

2.2

40.11

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007409

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027071

29872136 - 29879549

7414