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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29875704_29877439_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29875704 - 29877439

Intron Length:

1736

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TGGTCTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTGAT

U12 Branch Point Sequence:

GTCAAGGTAGCT

Flanking Amino Acid:

RIRATLFLPPGNGPFPGIID

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

75.3

34.6

Major BPS

64.7

0.36

1.2

55.1

42.1

Major PPT

75.4

0.57

69.1

41.8

Minor 5ss

-2.1

2.6

39.1

38.9

Minor BPS

-1

2.6

54.23

46.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007409

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027071

29872136 - 29879549

7414

ENSAPLT00000007704

29875244 - 29879549

4306