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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29877643_29878941_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29877643 - 29878941

Intron Length:

1299

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGCTTT

5'SS Class:

major

3'SS Sequence:

CTCTCCCATCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

GGTTTATTGATT

Flanking Amino Acid:

AINYMLKHTQVKGPGVGLLG

Intron Amino Acid Position:

265

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.2

70.9

41.9

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

74.6

0.55

0.9

34.9

Minor 5ss

44.7

-0.6

3.2

64.8

46.5

Minor BPS

57.5

0.32

1.6

73.31

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007409

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027071

29872136 - 29879549

7414