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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29893183_29894253_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29893183 - 29894253

Intron Length:

1071

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTAAGCTCA

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAC

U12 Branch Point Sequence:

TTTCTTTTAAAG

Flanking Amino Acid:

DESLSTLVNCEKLSLSTNCI

Intron Amino Acid Position:

360

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.47

1.1

62.3

39.2

Major BPS

69.3

0.48

1.1

39.5

Major PPT

84.1

0.77

0.9

86.1

25.6

Minor 5ss

45.4

-0.5

2.7

53.5

44.4

Minor BPS

65.1

0.33

1.4

69.62

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007953

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008258

29880664 - 29900303

19640