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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29897118_29898119_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29897118 - 29898119

Intron Length:

1002

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTACGTGCT

5'SS Class:

major

3'SS Sequence:

TGTCATTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

TTCCAGTTACCT

Flanking Amino Acid:

RNNIKNLNGLEAVGDTLEEL

Intron Amino Acid Position:

398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

71.7

38.2

Major BPS

72.5

0.56

1.2

39.9

Major PPT

81.9

0.72

0.9

73.1

41.8

Minor 5ss

34.4

-1.8

3.4

47.2

43.5

Minor BPS

45.7

-0.2

2.4

70.09

46.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007953

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008258

29880664 - 29900303

19640