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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29898789_29900253_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29898789 - 29900253

Intron Length:

1465

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCCT

U12 Branch Point Sequence:

TTTTTTTTTCCT

Flanking Amino Acid:

KRVPKLKKLDGILVIKQEED

Intron Amino Acid Position:

489

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

76.6

34.9

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

85.9

0.81

0.6

85.6

21.5

Minor 5ss

38.5

-1.3

2.9

46.1

43.6

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007953

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008258

29880664 - 29900303

19640