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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29925198_29929987_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29925198 - 29929987

Intron Length:

4790

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAG

U12 Branch Point Sequence:

TGCTACAGAACT

Flanking Amino Acid:

VELASLQNVKELDTSEEKKS

Intron Amino Acid Position:

486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.8

81.2

26.3

Major BPS

70.6

0.51

1.5

77.9

34.9

Major PPT

88.9

0.87

0.6

21.8

Minor 5ss

38.2

-1.3

3.1

49.9

46.6

Minor BPS

49.5

0.04

1.9

72.18

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008093

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008408

29911170 - 29931677

20508