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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2992869_2994100_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2992869 - 2994100

Intron Length:

1232

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGAGC

5'SS Class:

major

3'SS Sequence:

TTTTTCCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTCCTTACAG

Flanking Amino Acid:

GHIRIRAKSQGMALSLGDKI

Intron Amino Acid Position:

935

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

69.7

40.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

93.4

0.98

0.6

88.4

21.4

Minor 5ss

32.7

-2

3.1

43.6

43.7

Minor BPS

68.9

0.46

1.8

76.73

40.6

Associated Gene:

Gene:

COPB1

Ensembl Gene ID:

ENSAPLG00000007005

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007348

2992765 - 3011599

18835