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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2995081_2996520_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2995081 - 2996520

Intron Length:

1440

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTTAGTTTT

5'SS Class:

major

3'SS Sequence:

CCTCTTTGTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTAAT

U12 Branch Point Sequence:

ATTAAAGTAATT

Flanking Amino Acid:

MWAEFEWENKVTVNTNIIDL

Intron Amino Acid Position:

853

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

82.8

30.4

Major BPS

67.8

0.44

1.1

67.7

36.5

Major PPT

68.3

0.41

1.1

70.2

34.1

Minor 5ss

44.2

-0.6

2.8

60.5

37.8

Minor BPS

44.9

-0.3

2.3

69.56

41.1

Associated Gene:

Gene:

COPB1

Ensembl Gene ID:

ENSAPLG00000007005

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007348

2992765 - 3011599

18835