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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29976181_29978822_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

29976181 - 29978822

Intron Length:

2642

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTTCTC

5'SS Class:

major

3'SS Sequence:

TTTTCCTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TGTTTCAGGACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

1.1

42.1

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

88.9

0.87

0.6

85.2

22.1

Minor 5ss

37.5

-1.4

3.3

52.9

44.2

Minor BPS

54.1

0.21

1.8

77.61

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008185

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008523

29976079 - 29988025

11947