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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29980297_29981658_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29980297 - 29981658

Intron Length:

1362

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGTGAT

5'SS Class:

major

3'SS Sequence:

CCTTGTCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTCTCATTAAAG

Flanking Amino Acid:

TLYLSVDPYMRCRMNEDTGS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

74.1

36.5

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

83.4

0.75

0.8

80.3

31.8

Minor 5ss

33.1

-1.9

3.5

45.5

Minor BPS

63.5

0.29

1.8

70.06

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008185

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028004

29975021 - 29986823

11803

ENSAPLT00000008523

29976079 - 29988025

11947