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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29981851_29982802_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29981851 - 29982802

Intron Length:

952

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAA

U12 Branch Point Sequence:

TCCAACTCCACT

Flanking Amino Acid:

AILDGSLLQKLVPQLVNGCL

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

73.8

32.7

Major BPS

61.4

0.28

1.1

67.9

34.4

Major PPT

88.5

0.87

0.7

84.9

29.9

Minor 5ss

36.1

-1.6

3.2

46.7

48.6

Minor BPS

44.3

-0.3

2.1

61.74

47.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008185

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028004

29975021 - 29986823

11803

ENSAPLT00000008523

29976079 - 29988025

11947