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Intron Name: Anas_platyrhynchos_platyrhynchos_5_29982974_29983922_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29982974 - 29983922

Intron Length:

949

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTAAACTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTTAAAC

Flanking Amino Acid:

AGACGSLAGQIGRLEGCSRV

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

69.7

43.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

78.6

0.64

0.9

71.9

37.9

Minor 5ss

38.2

-1.3

3.1

49.2

47.1

Minor BPS

76.4

0.81

1.2

82.98

29.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008185

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028004

29975021 - 29986823

11803

ENSAPLT00000008523

29976079 - 29988025

11947