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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30012939_30014434_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30012939 - 30014434

Intron Length:

1496

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTCAT

U12 Branch Point Sequence:

CTGTTTGGGACA

Flanking Amino Acid:

EVANLLWAVQVSDIHISRFR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

67.1

0.42

1.4

71.4

45.1

Major PPT

87.2

0.84

0.7

79.8

32.2

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

42.9

-0.5

2.1

53.29

39.9

Associated Gene:

Gene:

TMEM62

Ensembl Gene ID:

ENSAPLG00000008795

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009157

29995949 - 30014602

18654