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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30035803_30037432_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30035803 - 30037432

Intron Length:

1630

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTAAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTCTTTAAAT

Flanking Amino Acid:

QLHTTAIDKEGRRAVKAGRY

Intron Amino Acid Position:

256

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

1.1

76.2

32.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

75.8

0.58

0.9

74.3

34.2

Minor 5ss

29.3

-2.4

2.9

33.7

41.5

Minor BPS

85.3

1.19

1.1

97.3

26.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008919

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009428

30025563 - 30057032

31470