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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30039523_30039978_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30039523 - 30039978

Intron Length:

456

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTGTA

5'SS Class:

major

3'SS Sequence:

TGGTTCTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGGTTCTTTACA

Flanking Amino Acid:

LMLWDAKLHKGARKVLHELI

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

1.1

75.3

34.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.5

0.73

0.9

76.3

37.8

Minor 5ss

38.7

-1.3

49.8

46.5

Minor BPS

64.3

0.44

1.6

71.5

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008919

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009428

30025563 - 30057032

31470