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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30042563_30042851_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30042563 - 30042851

Intron Length:

289

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAAAAA

5'SS Class:

major

3'SS Sequence:

ATCTCTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTCTAT

U12 Branch Point Sequence:

TCTAGCTTGAGT

Flanking Amino Acid:

SFLRILTCMQGMEEIKRQIG

Intron Amino Acid Position:

503

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

70.4

35.3

Major BPS

61.2

0.28

1.4

60.7

45.4

Major PPT

0.7

0.8

78.1

34.3

Minor 5ss

31.1

-2.2

3.2

39.8

45.8

Minor BPS

49.5

0.04

2.1

71.55

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008919

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009428

30025563 - 30057032

31470