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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30047561_30047965_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30047561 - 30047965

Intron Length:

405

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TGTACTCTGGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTCCTTTTGATG

Flanking Amino Acid:

EMLQILIYVVGERYVPGVSN

Intron Amino Acid Position:

742

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

78.8

38.3

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

66.1

0.36

62.5

39.6

Minor 5ss

43.4

-0.7

2.8

46.2

Minor BPS

55.4

0.03

1.3

58.55

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008919

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009428

30025563 - 30057032

31470