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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30065758_30067591_F

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

30065758 - 30067591

Intron Length:

1834

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTTTTCTTC

5'SS Class:

weak_minor

3'SS Sequence:

CTGTAGGTGGGAG|T

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

TTCCCTTTCACT

Flanking Amino Acid:

NNYETALPLFVVLSFPSLYW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.4

0.06

1.2

52.5

39.2

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

44.9

-0.2

1.8

45.8

45.5

Minor 5ss

53.8

0.13

2.3

65.9

39.8

Minor BPS

0.52

1.8

80.9

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024517

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022924

30065694 - 30076758

11065