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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30067744_30069276_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

30067744 - 30069276

Intron Length:

1533

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGT|GTATTTGGG

5'SS Class:

weak_major

3'SS Sequence:

ACATGCACGATAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TAATTTTTCACA

Flanking Amino Acid:

IVISSAKGRGLLCILEKQVT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.3

0.08

1.2

45.5

42.6

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

50.4

0.01

44.1

36.8

Minor 5ss

40.2

-1.1

3.1

49.1

47.1

Minor BPS

0.25

1.7

68.62

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024517

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022924

30065694 - 30076758

11065