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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30072546_30073035_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30072546 - 30073035

Intron Length:

490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTACTTACACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TCTTTTTTACTT

Flanking Amino Acid:

SCLKGKSIAIRYPRKRNSLI

Intron Amino Acid Position:

226

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

1.1

77.3

37.8

Major BPS

84.4

0.85

1.1

34.5

Major PPT

77.5

0.62

0.9

72.9

36.4

Minor 5ss

30.8

-2.2

3.1

41.8

44.7

Minor BPS

63.8

0.51

1.6

78.3

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024517

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028458

30066565 - 30076758

10194