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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30073114_30073716_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30073114 - 30073716

Intron Length:

603

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

ATGCTTTATCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

AATTCCTGAATT

Flanking Amino Acid:

SCLLNQASQFRCPRSSDDEQ

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.6

21.2

Major BPS

0.52

1.1

77.7

35.3

Major PPT

70.2

0.46

42.7

Minor 5ss

43.9

-0.7

3.2

64.8

46.5

Minor BPS

74.6

0.85

1.3

85.03

34.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024517

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028458

30066565 - 30076758

10194

ENSAPLT00000022924

30065694 - 30076758

11065