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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30076140_30076616_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30076140 - 30076616

Intron Length:

477

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTCTATGAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTATTCATATAT

Flanking Amino Acid:

DEYGETDPGLKRGNPLHLCR

Intron Amino Acid Position:

295

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

23.6

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

69.6

0.44

1.1

71.5

32.2

Minor 5ss

36.8

-1.5

2.7

42.6

38.4

Minor BPS

49.9

0.07

1.9

74.99

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024517

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022924

30065694 - 30076758

11065

ENSAPLT00000028458

30066565 - 30076758

10194