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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30085983_30087461_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30085983 - 30087461

Intron Length:

1479

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAA

U12 Branch Point Sequence:

CTCTGTTTAACC

Flanking Amino Acid:

IAALLIWLFELSVLTGVRYL

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

72.1

0.55

1.1

63.7

43.9

Major PPT

89.6

0.89

0.7

84.2

30.9

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

61.9

0.35

1.8

69.26

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010827

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011265

30085716 - 30090489

4774