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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30087709_30089908_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30087709 - 30089908

Intron Length:

2200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TGTCCTGTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AGATTTTTAATG

Flanking Amino Acid:

YLNMASKEVMDRLKSNVDGK

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

84.6

33.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.8

0.65

0.9

72.7

37.5

Minor 5ss

42.9

-0.8

2.9

41.2

Minor BPS

61.8

0.23

1.3

58.72

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010827

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011265

30085716 - 30090489

4774