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Intron Name: Anas_platyrhynchos_platyrhynchos_5_3008982_3010738_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3008982 - 3010738

Intron Length:

1757

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCGAG

5'SS Class:

major

3'SS Sequence:

GCTTGGATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

ATGTCTTTATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.1

59.3

41.8

Major BPS

83.9

0.84

73.9

41.3

Major PPT

67.1

0.39

62.6

43.1

Minor 5ss

28.8

-2.4

3.5

36.3

48.1

Minor BPS

0.55

1.5

77.76

39.5

Associated Gene:

Gene:

COPB1

Ensembl Gene ID:

ENSAPLG00000007005

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007348

2992765 - 3011599

18835