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Intron Name: Anas_platyrhynchos_platyrhynchos_5_3013070_3013691_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3013070 - 3013691

Intron Length:

622

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTGAGTAAA

5'SS Class:

major

3'SS Sequence:

TTTTATTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTGTATTTATCT

Flanking Amino Acid:

LERHMTEFTDCNLNELVKHG

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

72.6

33.5

Major BPS

88.7

0.96

0.8

36.5

Major PPT

82.3

0.73

87.2

30.4

Minor 5ss

32.5

-2

2.8

43.1

43.9

Minor BPS

61.6

0.44

1.8

80.6

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007846

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008194

3011620 - 3019593

7974