Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_30175285_30176274_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30175285 - 30176274

Intron Length:

990

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAATACGG

5'SS Class:

major

3'SS Sequence:

GTTTCTTCTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

AAAAAAATAATT

Flanking Amino Acid:

KPPTRPGVEARLRRYRVLGS

Intron Amino Acid Position:

763

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

59.2

45.5

Major BPS

71.2

0.53

70.3

31.9

Major PPT

75.8

0.58

79.8

32.6

Minor 5ss

31.4

-2.1

39.8

45.5

Minor BPS

42.5

-0.4

1.9

57.37

Associated Gene:

Gene:

TTBK2

Ensembl Gene ID:

ENSAPLG00000010860

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011311

30157463 - 30176743

19281