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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30204487_30205154_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30204487 - 30205154

Intron Length:

668

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAAAAA

5'SS Class:

major

3'SS Sequence:

GTTTCTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACCTAC

U12 Branch Point Sequence:

TTGTACCTACTG

Flanking Amino Acid:

ILAVLGWLFQVPSVPEELFF

Intron Amino Acid Position:

921

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

70.2

35.7

Major BPS

51.1

0.03

1.2

50.4

36.3

Major PPT

83.5

0.75

0.9

80.8

36.8

Minor 5ss

30.7

-2.2

3.2

39.2

46.2

Minor BPS

45.8

-0.4

2.1

56.81

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010970

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011451

30190596 - 30214680

24085