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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30210073_30211063_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30210073 - 30211063

Intron Length:

991

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTGAG

U12 Branch Point Sequence:

GCAGACAGGATT

Flanking Amino Acid:

ACGWLSANIAALIKREVKAT

Intron Amino Acid Position:

1146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.4

1.02

0.7

87.4

21.4

Major BPS

50.8

0.02

1.4

49.1

Major PPT

89.5

0.89

0.6

84.5

23.1

Minor 5ss

39.3

-1.2

2.9

45.2

Minor BPS

-0.8

1.8

47.08

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010970

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011451

30190596 - 30214680

24085