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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30211465_30211815_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30211465 - 30211815

Intron Length:

351

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAAGTA

5'SS Class:

major

3'SS Sequence:

CTGTGTTTTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGATAAA

U12 Branch Point Sequence:

AAAGATAAAACT

Flanking Amino Acid:

RLSQTLRCRKFMCPTSEQQL

Intron Amino Acid Position:

1235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.1

68.5

36.7

Major BPS

54.7

0.12

1.2

56.1

37.3

Major PPT

0.61

0.9

69.2

41.8

Minor 5ss

-2.1

3.8

46.4

48.9

Minor BPS

40.4

-0.6

1.9

54.3

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010970

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011451

30190596 - 30214680

24085