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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30213220_30213899_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30213220 - 30213899

Intron Length:

680

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TTCTTTTTGAGA

Flanking Amino Acid:

GYLSEVKQREWDLFLFMLHG

Intron Amino Acid Position:

1324

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

82.5

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

91.9

0.94

0.6

88.3

21.4

Minor 5ss

36.7

-1.5

3.5

55.8

48.4

Minor BPS

58.4

0.26

1.6

68.85

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010970

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011451

30190596 - 30214680

24085