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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30222080_30222501_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30222080 - 30222501

Intron Length:

422

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTTCCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCTAAT

U12 Branch Point Sequence:

CTTTCTTGGATG

Flanking Amino Acid:

HKKVTSHIQLVYLVTDTSLC

Intron Amino Acid Position:

2601

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

74.9

35.3

Major BPS

64.2

0.35

1.3

65.8

39.5

Major PPT

81.1

0.7

0.8

75.9

32.8

Minor 5ss

31.1

-2.2

2.6

35.1

Minor BPS

56.7

0.07

1.6

62.49

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039405

30219933 - 30239775

19843

ENSAPLT00000022433

30219933 - 30239588

19656