Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_30222860_30223472_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30222860 - 30223472

Intron Length:

613

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

ATTGTTTTCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTTCTCTTACCT

Flanking Amino Acid:

KHILANATTEVMAACSHNLR

Intron Amino Acid Position:

2511

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.7

88.4

18.8

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

71.4

0.48

1.1

75.7

37.9

Minor 5ss

29.6

-2.3

2.6

32.7

42.2

Minor BPS

71.9

0.77

1.6

88.99

35.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039405

30219933 - 30239775

19843

ENSAPLT00000022433

30219933 - 30239588

19656