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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30223616_30224192_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30223616 - 30224192

Intron Length:

577

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TTCCACTTACAA

Flanking Amino Acid:

LEQLQKDSTLEASRIQPPLP

Intron Amino Acid Position:

2463

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

83.2

30.8

Major BPS

79.2

0.73

75.3

39.4

Major PPT

83.1

0.75

0.8

77.8

Minor 5ss

34.6

-1.8

2.7

41.5

Minor BPS

48.7

-0.1

1.9

63.19

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039405

30219933 - 30239775

19843

ENSAPLT00000022433

30219933 - 30239588

19656