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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30224299_30224939_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30224299 - 30224939

Intron Length:

641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTAAACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAA

U12 Branch Point Sequence:

CTTTCCTAAACC

Flanking Amino Acid:

ASKLSSWDGQVSSGNVLLSR

Intron Amino Acid Position:

2428

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.88

0.8

76.8

33.7

Major BPS

72.7

0.57

72.1

31.1

Major PPT

70.4

0.46

64.4

40.5

Minor 5ss

27.4

-2.6

2.7

30.4

Minor BPS

74.5

0.75

1.7

82.21

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039405

30219933 - 30239775

19843

ENSAPLT00000022433

30219933 - 30239588

19656