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Intron Name: Anas_platyrhynchos_platyrhynchos_5_30271106_30275492_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30271106 - 30275492

Intron Length:

4387

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGTG

5'SS Class:

strong_major

3'SS Sequence:

TAATCTTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TCTTTTATAATC

Flanking Amino Acid:

EHPETGPYVQGLSQHLVTDY

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.8

35.2

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

72.8

0.51

69.5

Minor 5ss

28.6

-2.5

3.4

37.5

47.2

Minor BPS

60.7

0.31

1.6

70.1

35.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025892

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040829

30262846 - 30311105

48260